OV - gmx_mpi - Topology

Software Topology

▼Scalability - 1x1

Number processes: 1 Number nodes: 1 Number processes per node: 1 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	1	1	2177.3
►Process 12157+		1	2177.3
○Thread 12157			2177.3

▶Scalability - 2x1

Number processes: 2 Number nodes: 1 Number processes per node: 2 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	2	2	1107.18
►Process 12305+		1	1107.18
○Thread 12305			1107.18
►Process 12372+		1	1106.94
○Thread 12372			1106.94

▶Scalability - 4x1

Number processes: 4 Number nodes: 1 Number processes per node: 4 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	4	4	569.08
►Process 12494+		1	568.54
○Thread 12494			568.54
►Process 12495+		1	569.08
○Thread 12495			569.08
►Process 12496+		1	568.58
○Thread 12496			568.58
►Process 12695+		1	569.06
○Thread 12695			569.06

▶Scalability - 8x1

Number processes: 8 Number nodes: 1 Number processes per node: 8 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	8	8	296.98
►Process 12814+		1	296.59
○Thread 12814			296.59
►Process 12815+		1	296.78
○Thread 12815			296.78
►Process 12816+		1	296.46
○Thread 12816			296.46
►Process 12817+		1	296.98
○Thread 12817			296.98
►Process 12818+		1	296.68
○Thread 12818			296.68
►Process 12819+		1	296.63
○Thread 12819			296.63
►Process 12820+		1	296.59
○Thread 12820			296.59
►Process 12856+		1	296.62
○Thread 12856			296.62

▶Scalability - 16x1

Number processes: 16 Number nodes: 1 Number processes per node: 16 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	16	16	157.96
►Process 12950+		1	157.68
○Thread 12950			157.68
►Process 12951+		1	157.77
○Thread 12951			157.77
►Process 12952+		1	157.83
○Thread 12952			157.83
►Process 12953+		1	157.59
○Thread 12953			157.59
►Process 12954+		1	157.43
○Thread 12954			157.43
►Process 12955+		1	157.37
○Thread 12955			157.37
►Process 12956+		1	157.7
○Thread 12956			157.7
►Process 12957+		1	157.35
○Thread 12957			157.35
►Process 12958+		1	157.59
○Thread 12958			157.59
►Process 12959+		1	157.85
○Thread 12959			157.85
►Process 12960+		1	157.35
○Thread 12960			157.35
►Process 12961+		1	157.87
○Thread 12961			157.87
►Process 12962+		1	157.96
○Thread 12962			157.96
►Process 12963+		1	157.67
○Thread 12963			157.67
►Process 12964+		1	157.84
○Thread 12964			157.84
►Process 13040+		1	157.23
○Thread 13040			157.23

▶Scalability - 32x1

Number processes: 32 Number nodes: 1 Number processes per node: 32 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	32	32	95.39
►Process 13220+		1	95.24
○Thread 13220			95.24
►Process 13221+		1	93.53
○Thread 13221			93.53
►Process 13222+		1	93.32
○Thread 13222			93.32
►Process 13223+		1	93.58
○Thread 13223			93.58
►Process 13224+		1	95.34
○Thread 13224			95.34
►Process 13225+		1	93.63
○Thread 13225			93.63
►Process 13226+		1	95.3
○Thread 13226			95.3
►Process 13227+		1	95.19
○Thread 13227			95.19
►Process 13228+		1	95.26
○Thread 13228			95.26
►Process 13229+		1	95.39
○Thread 13229			95.39
►Process 13230+		1	95.31
○Thread 13230			95.31
►Process 13231+		1	95.31
○Thread 13231			95.31
►Process 13232+		1	93.33
○Thread 13232			93.33
►Process 13233+		1	95.28
○Thread 13233			95.28
►Process 13234+		1	93.67
○Thread 13234			93.67
►Process 13235+		1	95.22
○Thread 13235			95.22
►Process 13236+		1	95.39
○Thread 13236			95.39
►Process 13237+		1	95.18
○Thread 13237			95.18
►Process 13238+		1	95.35
○Thread 13238			95.35
►Process 13239+		1	93.71
○Thread 13239			93.71
►Process 13240+		1	95.25
○Thread 13240			95.25
►Process 13241+		1	95.29
○Thread 13241			95.29
►Process 13242+		1	95.18
○Thread 13242			95.18
►Process 13243+		1	95.33
○Thread 13243			95.33
►Process 13244+		1	95.18
○Thread 13244			95.18
►Process 13245+		1	95.29
○Thread 13245			95.29
►Process 13376+		1	95.23
○Thread 13376			95.23
►Process 13378+		1	95.25
○Thread 13378			95.25
►Process 13380+		1	95.39
○Thread 13380			95.39
►Process 13382+		1	93.67
○Thread 13382			93.67
►Process 13400+		1	95.35
○Thread 13400			95.35
►Process 13406+		1	95.21
○Thread 13406			95.21

▶Scalability - 64x1

Number processes: 64 Number nodes: 1 Number processes per node: 64 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-8-114+	64	64	53.09
►Process 13772+		1	52.82
○Thread 13772			52.82
►Process 13773+		1	52.99
○Thread 13773			52.99
►Process 13774+		1	53.06
○Thread 13774			53.06
►Process 13775+		1	51.03
○Thread 13775			51.03
►Process 13776+		1	52.9
○Thread 13776			52.9
►Process 13777+		1	52.81
○Thread 13777			52.81
►Process 13808+		1	52.75
○Thread 13808			52.75
►Process 13809+		1	51.23
○Thread 13809			51.23
►Process 13811+		1	52.88
○Thread 13811			52.88
►Process 13814+		1	52.81
○Thread 13814			52.81
►Process 13816+		1	53.01
○Thread 13816			53.01
►Process 13818+		1	53.05
○Thread 13818			53.05
►Process 13819+		1	52.88
○Thread 13819			52.88
►Process 13822+		1	52.88
○Thread 13822			52.88
►Process 13823+		1	50.93
○Thread 13823			50.93
►Process 13825+		1	52.87
○Thread 13825			52.87
►Process 13828+		1	51.14
○Thread 13828			51.14
►Process 13874+		1	52.83
○Thread 13874			52.83
►Process 13876+		1	51.43
○Thread 13876			51.43
►Process 13877+		1	53
○Thread 13877			53
►Process 13880+		1	51.26
○Thread 13880			51.26
►Process 13882+		1	52.85
○Thread 13882			52.85
►Process 13883+		1	52.88
○Thread 13883			52.88
►Process 13886+		1	52.79
○Thread 13886			52.79
►Process 13888+		1	52.86
○Thread 13888			52.86
►Process 13889+		1	52.91
○Thread 13889			52.91
►Process 13892+		1	52.85
○Thread 13892			52.85
►Process 13894+		1	51.29
○Thread 13894			51.29
►Process 13895+		1	52.83
○Thread 13895			52.83
►Process 13898+		1	52.77
○Thread 13898			52.77
►Process 13900+		1	52.69
○Thread 13900			52.69
►Process 13902+		1	51.08
○Thread 13902			51.08
►Process 13904+		1	53
○Thread 13904			53
►Process 13906+		1	53.02
○Thread 13906			53.02
►Process 13907+		1	50.89
○Thread 13907			50.89
►Process 13910+		1	52.91
○Thread 13910			52.91
►Process 13911+		1	52.8
○Thread 13911			52.8
►Process 13913+		1	52.81
○Thread 13913			52.81
►Process 13915+		1	52.77
○Thread 13915			52.77
►Process 13916+		1	51.12
○Thread 13916			51.12
►Process 13920+		1	52.98
○Thread 13920			52.98
►Process 13922+		1	52.98
○Thread 13922			52.98
►Process 13923+		1	51.41
○Thread 13923			51.41
►Process 13926+		1	52.89
○Thread 13926			52.89
►Process 13930+		1	52.95
○Thread 13930			52.95
►Process 13936+		1	51.31
○Thread 13936			51.31
►Process 13944+		1	52.92
○Thread 13944			52.92
►Process 13945+		1	51.2
○Thread 13945			51.2
►Process 13949+		1	53.02
○Thread 13949			53.02
►Process 13964+		1	52.88
○Thread 13964			52.88
►Process 13965+		1	53.09
○Thread 13965			53.09
►Process 13966+		1	53.01
○Thread 13966			53.01
►Process 13967+		1	52.98
○Thread 13967			52.98
►Process 13974+		1	51.08
○Thread 13974			51.08
►Process 13984+		1	52.96
○Thread 13984			52.96
►Process 13985+		1	52.91
○Thread 13985			52.91
►Process 13988+		1	53.05
○Thread 13988			53.05
►Process 14002+		1	51.16
○Thread 14002			51.16
►Process 14003+		1	53.05
○Thread 14003			53.05
►Process 14014+		1	52.96
○Thread 14014			52.96
►Process 14015+		1	53.08
○Thread 14015			53.08
►Process 14037+		1	51.02
○Thread 14037			51.02
►Process 14044+		1	53.06
○Thread 14044			53.06
►Process 14150+		1	53.02
○Thread 14150			53.02

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