********************************************************************************
MAQAO 2.17.4 - Build information not available || 2023/06/10
maqao OV -R3 dbg=1 c=config.lua xp=OV3_icc_128T --replace
Profiling starting with application.
You can delay profiling by setting the profile_start field in the configuration file and restart ONE-View with a new experiment directory.
CMD: OMP_NUM_THREADS=128 /ccc/scratch/cont001/ocre/oserete/MAQAO_src/bin/maqao lprof --xp="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/lprof_npsu_run_0" --mpi-command="" -ldi=libgromacs.so.8 -- /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
In run 1x128, 219 loops were discarded from static analysis because their coverage
are lower than object_coverage_threshold value (0.01%).
That represents 0% of the execution time. To include them, change the value
in the experiment directory configuration file, then rerun the command with the additionnal parameter
--force-static-analysis
426 functions were discarded from static analysis because their coverage
are lower than object_coverage_threshold value (0.01%).
That represents 0% of the execution time. To include them, change the value
in the experiment directory configuration file, then rerun the command with the additionnal parameter
--force-static-analysis
CMD: /ccc/scratch/cont001/ocre/oserete/MAQAO_src/bin/maqao vprof --run-cmd-prefix=" OMP_NUM_THREADS=128 " --disable-reg-counter uarch=ZEN_V3 --project="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/vprof/run_0/" --allow-invalid-loops --report-mode=none --loop-bucket-instance-count=93 --enable-mt --loop-id="" --external-libraries="{lib=libgromacs.so.8; loops=6783}" -- /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
CMD: /ccc/scratch/cont001/ocre/oserete/MAQAO_src/bin/maqao vprof /ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/binaries/gmx -op="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/vprof/run_0//host.csv" --report-pid=.* --report-tid=.* --run-id=0000 --instru-id=0000 --project="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/vprof/run_0/" -of=csv --loop-bucket-instance-count=93 --loop-id="" --external-libraries="{lib=libgromacs.so.8; loops=6783}"
HWC [MAB_ALLOCATION_BY_PIPE:DATA_PIPE] availability: false
HWC [MAB_ALLOCATION_BY_PIPE:ST_PIPE] availability: false
HWC [MAB_ALLOCATION_BY_PIPE:HW_PF] availability: false
HWC [L1_DTLB_MISS:TLB_RELOAD_COALESCED_PAGE_HIT] availability: true
HWC [L1_DTLB_MISS:TLB_RELOAD_COALESCED_PAGE_MISS] availability: true
HWC [L1_DTLB_MISS:TLB_RELOAD_1G_L2_MISS] availability: true
HWC [L1_DTLB_MISS:TLB_RELOAD_4K_L2_MISS] availability: true
HWC [L1_DTLB_MISS:TLB_RELOAD_1G_L2_HIT] availability: true
HWC [L1_DTLB_MISS:TLB_RELOAD_4K_L2_HIT] availability: true
HWC [TLB_FLUSHES:ANY] availability: false
HWC [SOFTWARE_PREFETCH_DATA_CACHE_FILLS:LS_MABRESP_LCL_RMT_DRAM] availability: false
HWC [SOFTWARE_PREFETCH_DATA_CACHE_FILLS:LS_MABRESP_LCL_RMT_CACHE] availability: false
HWC [SOFTWARE_PREFETCH_DATA_CACHE_FILLS:LS_MABRESP_LCL_DRAM] availability: false
HWC [SOFTWARE_PREFETCH_DATA_CACHE_FILLS:LS_MABRESP_LCL_CACHE] availability: false
HWC [SOFTWARE_PREFETCH_DATA_CACHE_FILLS:MABRESP_LCL_L2] availability: false
HWC [HARDWARE_PREFETCH_DATA_CACHE_FILLS:LS_MABRESP_LCL_RMT_DRAM] availability: false
HWC [HARDWARE_PREFETCH_DATA_CACHE_FILLS:LS_MABRESP_LCL_RMT_CACHE] availability: false
HWC [HARDWARE_PREFETCH_DATA_CACHE_FILLS:LS_MABRESP_LCL_DRAM] availability: false
HWC [HARDWARE_PREFETCH_DATA_CACHE_FILLS:LS_MABRESP_LCL_CACHE] availability: false
HWC [HARDWARE_PREFETCH_DATA_CACHE_FILLS:MABRESP_LCL_L2] availability: false
HWC [CYCLES_NOT_IN_HALT] availability: true
HWC [UOPS_DISPATCHED_FROM_DECODER:DECODER_DISPATCHED] availability: false
HWC [UOPS_DISPATCHED_FROM_DECODER:OPCACHE_DISPATCHED] availability: false
HWC [DISPATCH_RESOURCE_STALL_CYCLES_1:TAKEN_BRANCH_BUFFER_RSRC_STALL] availability: true
HWC [DISPATCH_RESOURCE_STALL_CYCLES_0:ALU_TOKEN_STALL] availability: false
HWC [DISPATCH_RESOURCE_STALL_CYCLES_1:INT_SCHEDULER_MISC_RSRC_STALL] availability: false
HWC [DISPATCH_RESOURCE_STALL_CYCLES_1:INT_PHY_REG_FILE_RSRC_STALL] availability: true
HWC [DISPATCH_RESOURCE_STALL_CYCLES_1:FP_SCHEDULER_FILE_RSRC_STALL] availability: false
HWC [DISPATCH_RESOURCE_STALL_CYCLES_1:FP_REG_FILE_RSRC_STALL] availability: true
HWC [DISPATCH_RESOURCE_STALL_CYCLES_1:FP_MISC_FILE_RSRC_STALL] availability: false
HWC [DIV_CYCLES_BUSY_COUNT] availability: true
HWC [RETIRED_INSTRUCTIONS] availability: true
HWC [RETIRED_UOPS] availability: false
HWC [RETIRED_BRANCH_INSTRUCTIONS] availability: true
HWC [RETIRED_BRANCH_INSTRUCTIONS_MISPREDICTED] availability: true
HWC [CORE_TO_L2_CACHEABLE_REQUEST_ACCESS_STATUS:IC_FILL_MISS] availability: true
HWC [CORE_TO_L2_CACHEABLE_REQUEST_ACCESS_STATUS:LS_RD_BLK_C] availability: true
HWC [L2_PREFETCH_HIT_L2:ANY] availability: false
HWC [L2_PREFETCH_HIT_L3:ANY] availability: false
HWC [L2_PREFETCH_MISS_L3:ANY] availability: false
HWC [DISPATCH_RESOURCE_STALL_CYCLES_1:STORE_QUEUE_RSRC_STALL] availability: true
HWC [DISPATCH_RESOURCE_STALL_CYCLES_1:LOAD_QUEUE_RSRC_STALL] availability: true
HWC [L1_DTLB_MISS:TLB_RELOAD_2M_L2_HIT] availability: true
HWC [L1_DTLB_MISS:TLB_RELOAD_2M_L2_MISS] availability: true
HWC [L3_MISSES] availability: false
HWC [UMC0_TRANS] availability: false
HWC [UMC1_TRANS] availability: false
HWC [UMC2_TRANS] availability: false
HWC [UMC3_TRANS] availability: false
HWC [UMC4_TRANS] availability: false
HWC [UMC5_TRANS] availability: false
HWC [UMC6_TRANS] availability: false
HWC [UMC7_TRANS] availability: false
Info: For loop 6783, bucket 1 is not analyzed because it is below the threshold (0.02 < 1)
Info: For loop 6783, bucket 3 is not analyzed because it is below the threshold (0.295 < 1)
Info: For loop 6783, bucket 7 is not analyzed because it is below the threshold (0.56 < 1)
Info: For loop 6783, bucket 8 is not analyzed because it is below the threshold (0.3 < 1)
Info: For loop 6783, bucket 9 is not analyzed because it is below the threshold (0.285 < 1)
Info: For loop 6783, bucket 10 is not analyzed because it is below the threshold (0.01 < 1)
Info: For loop 6783, bucket 11 is not analyzed because it is below the threshold (0 < 1)
Info: For loop 6783, bucket 12 is not analyzed because it is below the threshold (0 < 1)
CMD: /ccc/scratch/cont001/ocre/oserete/MAQAO_src/bin/maqao decan -c="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/configs/config_ALL_time.decan" proc=AMD_fam19h_mod01h arch=x86_64
CMD: /ccc/scratch/cont001/ocre/oserete/MAQAO_src/bin/maqao decan -c="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/configs/config_ALL_hc.decan" proc=AMD_fam19h_mod01h arch=x86_64
CMD: LD_LIBRARY_PATH="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/binaries/ALL/time//:/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/dataset:/ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/lib64:/ccc/scratch/cont001/ocre/oserete/MAQAO_src/lib:/ccc/products/mkl-23.1.0/system/default/23.1.0//lib/intel64:/ccc/products/mkl-23.1.0/system/default/23.1.0/mkl/lib/intel64:/ccc/products/ifx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib:/ccc/products/icx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/icx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/icx-23.1.0/system/default/23.1.0/lib" OMP_NUM_THREADS=1 OMP_NUM_THREADS=128 DECAN_OUTPUT=gmx_ALL_time /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
CMD: LD_LIBRARY_PATH="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/binaries/ALL/hc//:/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/dataset:/ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/lib64:/ccc/scratch/cont001/ocre/oserete/MAQAO_src/lib:/ccc/products/mkl-23.1.0/system/default/23.1.0//lib/intel64:/ccc/products/mkl-23.1.0/system/default/23.1.0/mkl/lib/intel64:/ccc/products/ifx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib:/ccc/products/icx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/icx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/icx-23.1.0/system/default/23.1.0/lib" OMP_NUM_THREADS=1 OMP_NUM_THREADS=128 DECAN_HWC=L1_DTLB_MISS:TLB_RELOAD_COALESCED_PAGE_HIT,L1_DTLB_MISS:TLB_RELOAD_COALESCED_PAGE_MISS DECAN_OUTPUT=gmx_ALL_HWC2 /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
CMD: LD_LIBRARY_PATH="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/binaries/ALL/hc//:/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/dataset:/ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/lib64:/ccc/scratch/cont001/ocre/oserete/MAQAO_src/lib:/ccc/products/mkl-23.1.0/system/default/23.1.0//lib/intel64:/ccc/products/mkl-23.1.0/system/default/23.1.0/mkl/lib/intel64:/ccc/products/ifx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib:/ccc/products/icx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/icx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/icx-23.1.0/system/default/23.1.0/lib" OMP_NUM_THREADS=1 OMP_NUM_THREADS=128 DECAN_HWC=L1_DTLB_MISS:TLB_RELOAD_1G_L2_MISS,L1_DTLB_MISS:TLB_RELOAD_4K_L2_MISS,L1_DTLB_MISS:TLB_RELOAD_1G_L2_HIT,L1_DTLB_MISS:TLB_RELOAD_4K_L2_HIT DECAN_OUTPUT=gmx_ALL_HWC3 /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
CMD: LD_LIBRARY_PATH="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/binaries/ALL/hc//:/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/dataset:/ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/lib64:/ccc/scratch/cont001/ocre/oserete/MAQAO_src/lib:/ccc/products/mkl-23.1.0/system/default/23.1.0//lib/intel64:/ccc/products/mkl-23.1.0/system/default/23.1.0/mkl/lib/intel64:/ccc/products/ifx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib:/ccc/products/icx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/icx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/icx-23.1.0/system/default/23.1.0/lib" OMP_NUM_THREADS=1 OMP_NUM_THREADS=128 DECAN_HWC=CYCLES_NOT_IN_HALT,DISPATCH_RESOURCE_STALL_CYCLES_1:TAKEN_BRANCH_BUFFER_RSRC_STALL DECAN_OUTPUT=gmx_ALL_HWC4 /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
CMD: LD_LIBRARY_PATH="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/binaries/ALL/hc//:/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/dataset:/ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/lib64:/ccc/scratch/cont001/ocre/oserete/MAQAO_src/lib:/ccc/products/mkl-23.1.0/system/default/23.1.0//lib/intel64:/ccc/products/mkl-23.1.0/system/default/23.1.0/mkl/lib/intel64:/ccc/products/ifx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib:/ccc/products/icx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/icx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/icx-23.1.0/system/default/23.1.0/lib" OMP_NUM_THREADS=1 OMP_NUM_THREADS=128 DECAN_HWC=DISPATCH_RESOURCE_STALL_CYCLES_1:INT_PHY_REG_FILE_RSRC_STALL,DISPATCH_RESOURCE_STALL_CYCLES_1:FP_REG_FILE_RSRC_STALL DECAN_OUTPUT=gmx_ALL_HWC5 /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
CMD: LD_LIBRARY_PATH="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/binaries/ALL/hc//:/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/dataset:/ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/lib64:/ccc/scratch/cont001/ocre/oserete/MAQAO_src/lib:/ccc/products/mkl-23.1.0/system/default/23.1.0//lib/intel64:/ccc/products/mkl-23.1.0/system/default/23.1.0/mkl/lib/intel64:/ccc/products/ifx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib:/ccc/products/icx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/icx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/icx-23.1.0/system/default/23.1.0/lib" OMP_NUM_THREADS=1 OMP_NUM_THREADS=128 DECAN_HWC=DIV_CYCLES_BUSY_COUNT,RETIRED_INSTRUCTIONS,RETIRED_BRANCH_INSTRUCTIONS,RETIRED_BRANCH_INSTRUCTIONS_MISPREDICTED DECAN_OUTPUT=gmx_ALL_HWC6 /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
CMD: LD_LIBRARY_PATH="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/binaries/ALL/hc//:/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/dataset:/ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/lib64:/ccc/scratch/cont001/ocre/oserete/MAQAO_src/lib:/ccc/products/mkl-23.1.0/system/default/23.1.0//lib/intel64:/ccc/products/mkl-23.1.0/system/default/23.1.0/mkl/lib/intel64:/ccc/products/ifx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib:/ccc/products/icx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/icx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/icx-23.1.0/system/default/23.1.0/lib" OMP_NUM_THREADS=1 OMP_NUM_THREADS=128 DECAN_HWC=CORE_TO_L2_CACHEABLE_REQUEST_ACCESS_STATUS:IC_FILL_MISS,CORE_TO_L2_CACHEABLE_REQUEST_ACCESS_STATUS:LS_RD_BLK_C DECAN_OUTPUT=gmx_ALL_HWC7 /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
CMD: LD_LIBRARY_PATH="/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/tools/decan/run_0/binaries/ALL/hc//:/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/dataset:/ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/lib64:/ccc/scratch/cont001/ocre/oserete/MAQAO_src/lib:/ccc/products/mkl-23.1.0/system/default/23.1.0//lib/intel64:/ccc/products/mkl-23.1.0/system/default/23.1.0/mkl/lib/intel64:/ccc/products/ifx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/ifx-23.1.0/system/default/23.1.0/lib:/ccc/products/icx-23.1.0/system/default/23.1.0/compiler/lib/intel64_lin:/ccc/products/icx-23.1.0/system/default/23.1.0/lib/x64:/ccc/products/icx-23.1.0/system/default/23.1.0/lib" OMP_NUM_THREADS=1 OMP_NUM_THREADS=128 DECAN_HWC=DISPATCH_RESOURCE_STALL_CYCLES_1:STORE_QUEUE_RSRC_STALL,DISPATCH_RESOURCE_STALL_CYCLES_1:LOAD_QUEUE_RSRC_STALL,L1_DTLB_MISS:TLB_RELOAD_2M_L2_HIT,L1_DTLB_MISS:TLB_RELOAD_2M_L2_MISS DECAN_OUTPUT=gmx_ALL_HWC8 /ccc/work/cont001/ocre/oserete/gromacs-2023.1-install-icc-2/bin/gmx mdrun -s ion_channel.tpr -ntmpi 1 -nsteps 10000 -pin on -deffnm icc-2
CMD: /ccc/scratch/cont001/ocre/oserete/MAQAO_src/bin/maqao otter -input=/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/OTTER/input_manifest.csv -output=/ccc/work/cont001/ocre/oserete/GROMACS_DATA/OV3_icc_128T/OTTER/output_manifest.csv -dbg=1
