OV - gmx_mpi - Topology

Software Topology

▼Scalability - 1x1

Number processes: 1 Number nodes: 1 Number processes per node: 1 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-70-148+	1	1	1792.61
►Process 15688+		1	1792.61
○Thread 15688			1792.61

▶Scalability - 2x1

Number processes: 2 Number nodes: 1 Number processes per node: 2 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-70-148+	2	2	921.05
►Process 15823+		1	921.05
○Thread 15823			921.05
►Process 15890+		1	920.6
○Thread 15890			920.6

▶Scalability - 4x1

Number processes: 4 Number nodes: 1 Number processes per node: 4 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-70-148+	4	4	475.47
►Process 16004+		1	475.47
○Thread 16004			475.47
►Process 16005+		1	475.02
○Thread 16005			475.02
►Process 16011+		1	475.12
○Thread 16011			475.12
►Process 16205+		1	475.35
○Thread 16205			475.35

▶Scalability - 8x1

Number processes: 8 Number nodes: 1 Number processes per node: 8 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-70-148+	8	8	253.27
►Process 16326+		1	253.08
○Thread 16326			253.08
►Process 16327+		1	252.9
○Thread 16327			252.9
►Process 16328+		1	253
○Thread 16328			253
►Process 16329+		1	253.27
○Thread 16329			253.27
►Process 16330+		1	253.16
○Thread 16330			253.16
►Process 16331+		1	253.23
○Thread 16331			253.23
►Process 16332+		1	252.85
○Thread 16332			252.85
►Process 16368+		1	253.22
○Thread 16368			253.22

▶Scalability - 16x1

Number processes: 16 Number nodes: 1 Number processes per node: 16 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-70-148+	16	16	136.08
►Process 16463+		1	135.6
○Thread 16463			135.6
►Process 16464+		1	135.72
○Thread 16464			135.72
►Process 16465+		1	135.87
○Thread 16465			135.87
►Process 16466+		1	135.51
○Thread 16466			135.51
►Process 16467+		1	135.73
○Thread 16467			135.73
►Process 16468+		1	135.61
○Thread 16468			135.61
►Process 16469+		1	135.91
○Thread 16469			135.91
►Process 16470+		1	135.83
○Thread 16470			135.83
►Process 16471+		1	135.99
○Thread 16471			135.99
►Process 16472+		1	135.85
○Thread 16472			135.85
►Process 16473+		1	135.48
○Thread 16473			135.48
►Process 16474+		1	135.51
○Thread 16474			135.51
►Process 16475+		1	135.79
○Thread 16475			135.79
►Process 16476+		1	135.84
○Thread 16476			135.84
►Process 16477+		1	136.08
○Thread 16477			136.08
►Process 16553+		1	135.49
○Thread 16553			135.49

▶Scalability - 32x1

Number processes: 32 Number nodes: 1 Number processes per node: 32 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-70-148+	32	32	88.44
►Process 16734+		1	86.62
○Thread 16734			86.62
►Process 16735+		1	88.27
○Thread 16735			88.27
►Process 16736+		1	88.26
○Thread 16736			88.26
►Process 16737+		1	88.22
○Thread 16737			88.22
►Process 16738+		1	86.66
○Thread 16738			86.66
►Process 16739+		1	88.32
○Thread 16739			88.32
►Process 16740+		1	88.35
○Thread 16740			88.35
►Process 16741+		1	86.55
○Thread 16741			86.55
►Process 16742+		1	88.34
○Thread 16742			88.34
►Process 16743+		1	88.43
○Thread 16743			88.43
►Process 16744+		1	88.36
○Thread 16744			88.36
►Process 16745+		1	88.36
○Thread 16745			88.36
►Process 16746+		1	88.24
○Thread 16746			88.24
►Process 16747+		1	88.32
○Thread 16747			88.32
►Process 16748+		1	88.37
○Thread 16748			88.37
►Process 16749+		1	88.22
○Thread 16749			88.22
►Process 16830+		1	88.23
○Thread 16830			88.23
►Process 16832+		1	88.3
○Thread 16832			88.3
►Process 16834+		1	88.31
○Thread 16834			88.31
►Process 16835+		1	88.37
○Thread 16835			88.37
►Process 16838+		1	86.46
○Thread 16838			86.46
►Process 16839+		1	88.39
○Thread 16839			88.39
►Process 16842+		1	86.42
○Thread 16842			86.42
►Process 16843+		1	88.44
○Thread 16843			88.44
►Process 16846+		1	88.38
○Thread 16846			88.38
►Process 16847+		1	86.67
○Thread 16847			86.67
►Process 16850+		1	88.32
○Thread 16850			88.32
►Process 16852+		1	88.44
○Thread 16852			88.44
►Process 16854+		1	88.39
○Thread 16854			88.39
►Process 16855+		1	86.83
○Thread 16855			86.83
►Process 16858+		1	88.44
○Thread 16858			88.44
►Process 16920+		1	86.85
○Thread 16920			86.85

▶Scalability - 64x1

Number processes: 64 Number nodes: 1 Number processes per node: 64 Run Command: <executable> mdrun -s ion_channel.tpr -nsteps 10000 --resetstep 8000 -pin on -deffnm armclangMPI Command: mpirun -n <number_processes> --bind-to coreRun Directory: /home/eoseret/GROMACS/DATA/GROMACS_TestCaseAOMP_NUM_THREADS: 1

ID	Observed Processes	Observed Threads	Time(s)
►Node ip-172-31-70-148+	64	64	54.78
►Process 17273+		1	52.81
○Thread 17273			52.81
►Process 17274+		1	54.66
○Thread 17274			54.66
►Process 17275+		1	54.53
○Thread 17275			54.53
►Process 17279+		1	54.58
○Thread 17279			54.58
►Process 17280+		1	52.88
○Thread 17280			52.88
►Process 17281+		1	54.66
○Thread 17281			54.66
►Process 17285+		1	54.51
○Thread 17285			54.51
►Process 17287+		1	52.74
○Thread 17287			52.74
►Process 17288+		1	54.73
○Thread 17288			54.73
►Process 17291+		1	54.47
○Thread 17291			54.47
►Process 17293+		1	54.6
○Thread 17293			54.6
►Process 17339+		1	54.6
○Thread 17339			54.6
►Process 17340+		1	54.66
○Thread 17340			54.66
►Process 17342+		1	54.43
○Thread 17342			54.43
►Process 17345+		1	54.55
○Thread 17345			54.55
►Process 17347+		1	54.54
○Thread 17347			54.54
►Process 17349+		1	52.83
○Thread 17349			52.83
►Process 17350+		1	52.98
○Thread 17350			52.98
►Process 17351+		1	54.54
○Thread 17351			54.54
►Process 17355+		1	54.76
○Thread 17355			54.76
►Process 17357+		1	54.59
○Thread 17357			54.59
►Process 17358+		1	54.47
○Thread 17358			54.47
►Process 17359+		1	53.02
○Thread 17359			53.02
►Process 17363+		1	54.66
○Thread 17363			54.66
►Process 17365+		1	54.6
○Thread 17365			54.6
►Process 17367+		1	54.41
○Thread 17367			54.41
►Process 17368+		1	53
○Thread 17368			53
►Process 17371+		1	54.7
○Thread 17371			54.7
►Process 17373+		1	52.61
○Thread 17373			52.61
►Process 17375+		1	54.7
○Thread 17375			54.7
►Process 17377+		1	54.34
○Thread 17377			54.34
►Process 17378+		1	54.61
○Thread 17378			54.61
►Process 17381+		1	54.69
○Thread 17381			54.69
►Process 17382+		1	54.64
○Thread 17382			54.64
►Process 17385+		1	52.92
○Thread 17385			52.92
►Process 17386+		1	54.63
○Thread 17386			54.63
►Process 17387+		1	54.49
○Thread 17387			54.49
►Process 17391+		1	54.59
○Thread 17391			54.59
►Process 17393+		1	54.47
○Thread 17393			54.47
►Process 17394+		1	54.72
○Thread 17394			54.72
►Process 17395+		1	54.56
○Thread 17395			54.56
►Process 17399+		1	52.87
○Thread 17399			52.87
►Process 17406+		1	54.57
○Thread 17406			54.57
►Process 17411+		1	52.88
○Thread 17411			52.88
►Process 17415+		1	54.66
○Thread 17415			54.66
►Process 17416+		1	54.57
○Thread 17416			54.57
►Process 17417+		1	52.77
○Thread 17417			52.77
►Process 17427+		1	54.71
○Thread 17427			54.71
►Process 17439+		1	54.62
○Thread 17439			54.62
►Process 17440+		1	54.66
○Thread 17440			54.66
►Process 17448+		1	54.58
○Thread 17448			54.58
►Process 17453+		1	52.86
○Thread 17453			52.86
►Process 17466+		1	54.78
○Thread 17466			54.78
►Process 17477+		1	54.52
○Thread 17477			54.52
►Process 17482+		1	54.75
○Thread 17482			54.75
►Process 17491+		1	54.68
○Thread 17491			54.68
►Process 17494+		1	54.59
○Thread 17494			54.59
►Process 17496+		1	54.61
○Thread 17496			54.61
►Process 17498+		1	52.84
○Thread 17498			52.84
►Process 17511+		1	54.56
○Thread 17511			54.56
►Process 17513+		1	54.72
○Thread 17513			54.72
►Process 17528+		1	52.71
○Thread 17528			52.71
►Process 17639+		1	53.02
○Thread 17639			53.02
►Process 17651+		1	54.58
○Thread 17651			54.58

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